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Missing Data
•
reset
3
votes
5
replies
7.6k
views
Wgcna with missing values - error with calculation of bicor correlations in pickSoftThreshold and blockwiseModules
software error
rnaseq
wgcna
missing data
8.4 years ago • updated 8.0 years ago
dvillarlozano
▴ 10
0
votes
4
replies
2.8k
views
how to handle missing data for SampleTable in DESeq2
deseq2
sample_table
missing data
updated 5.3 years ago by
g.wang2
• 0 • written 9.1 years ago by
anpham
▴ 60
0
votes
13
replies
2.4k
views
handling missing data (NA) for methylaion analysis in Limma
limma
missing data
methylation
normalization
updated 6.5 years ago by
Aaron Lun
★ 28k • written 6.5 years ago by
mheydarpour
▴ 10
2
votes
5
replies
2.4k
views
Why does limma contrast.fit produces NA's for all contrast although missing data only in one condition?
limma
contrast
missing data
lmfit
makecontrasts
updated 6.7 years ago by
Gordon Smyth
50k • written 6.7 years ago by
wewolski
▴ 10
1
vote
3
replies
1.5k
views
Missing Clinical LIHC Data
Missing Data
TCGAbiolinks
Kaplan-Meier
LIHC
Xenabrowser
4.5 years ago
jam526
• 0
0
votes
0
replies
1.5k
views
Possible methodologies for missing value imputation of continuous variables in a data frame in R
missing data
missing value imputation
impute
MICE
bioconductor
8.6 years ago
svlachavas
▴ 830
0
votes
1
reply
1.5k
views
workflowInstall issues; missing Windows binary
software error
missing data
workflowinstall
9.0 years ago
anoll2
• 0
0
votes
0
replies
1.3k
views
baySeq missing data
bayseq
missing data
9.0 years ago
k.w.lau
• 0
0
votes
1
reply
1.3k
views
DESeq2 paired design with missing samples and multiple conditions
deseq2
paired samples
missing data
multiple treatments
updated 5.4 years ago by
Michael Love
41k • written 5.4 years ago by
greg.deakin
• 0
1
vote
1
reply
1.0k
views
filter rows by missing values frequency
missing data
filter
updated 8.4 years ago by
James W. MacDonald
65k • written 8.4 years ago by
rgescudero
• 0
0
votes
1
reply
1.0k
views
Web CellHTS2 data upload
cellhts2
upload
missing data
updated 8.3 years ago by
Joseph Barry
▴ 160 • written 8.3 years ago by
zmorehouse
• 0
0
votes
0
replies
824
views
imputing data using pcaMethods with large amounts of missing data in rows
pcamethods
missing data
7.1 years ago
eli-sava
• 0
12 results • Page
1 of 1
Recent ...
Replies
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
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to
Michael Love
41k
Popular Question
to
Malcolm Cook
★ 1.6k
Teacher
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Gordon Smyth
50k
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priyanka.m
• 0
Popular Question
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Vincent J. Carey, Jr.
6.7k
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